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  5. LOC_Os03g15580.1

LOC_Os03g15580.1 (LOC_Os03g15580)


Aliases : LOC_Os03g15580

Description : RAD17 spindle assembly checkpoint protein


Gene families : OG0004512 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g15580.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00268620 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
AT1G77620 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Ehy_g12145 No alias spindle assembly checkpoint protein *(RAD17) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008880001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.05 OrthoFinder output from all 47 species
Len_g08660 No alias spindle assembly checkpoint protein *(RAD17) & original... 0.02 OrthoFinder output from all 47 species
MA_10430080g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g21766 No alias spindle assembly checkpoint protein *(RAD17) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007326 No alias spindle assembly checkpoint protein *(RAD17) & original... 0.05 OrthoFinder output from all 47 species
Sam_g39645 No alias spindle assembly checkpoint protein *(RAD17) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g060350.4.1 Solyc06g060350 RAD17 spindle assembly checkpoint protein 0.05 OrthoFinder output from all 47 species
Zm00001e038529_P001 Zm00001e038529 RAD17 spindle assembly checkpoint protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!