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  5. LOC_Os03g13614.3

LOC_Os03g13614.3 (bZIP16, AtbZIP16,...)


Aliases : bZIP16, AtbZIP16, LOC_Os03g13614

Description : transcription factor (bZIP)


Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13614.3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00094730 GBF1,... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
Adi_g087388 GBF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10998 bZIP16, AtbZIP16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06698 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20173 GBF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G038200.1 bZIP16,... bZIP class-G transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g43489 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09545 GBF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013053001 bZIP16, AtbZIP16 RNA biosynthesis.transcriptional activation.bZIP... 0.07 OrthoFinder output from all 47 species
Gb_13495 bZIP16, AtbZIP16 transcription factor (bZIP) 0.01 OrthoFinder output from all 47 species
Gb_21161 bZIP16, AtbZIP16 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Lfl_g08779 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_127542g0020 GBF1 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Ppi_g32400 bZIP16, AtbZIP16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25239 No alias bZIP class-G transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g49203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g005290.3.1 bZIP16,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Solyc08g076100.4.1 bZIP16,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e000997_P001 bZIP16,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e017863_P001 bZIP68,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e039821_P001 bZIP68,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR012900 MFMR 1 100
IPR004827 bZIP 299 361
No external refs found!