LOC_Os03g13570.1 (XTH27, ATXTH27,...)

Aliases : XTH27, ATXTH27, EXGT-A3, LOC_Os03g13570

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana (sp|q38909|xth28_arath : 386.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 201.2)

Gene families : OG0000942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000942_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g13570.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00167480	XTH32,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.08	OrthoFinder output from all 47 species
AMTR_s00048p00113910	XTH27, ATXTH27,...	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	OrthoFinder output from all 47 species
AMTR_s00082p00180450	XTH32,...	Cell wall.hemicellulose.xyloglucan.modification and...	0.02	OrthoFinder output from all 47 species
AT1G10550	XET, XTH33	xyloglucan:xyloglucosyl transferase 33	0.02	OrthoFinder output from all 47 species
AT1G32170	XTR4, XTH30	xyloglucan endotransglucosylase/hydrolase 30	0.04	OrthoFinder output from all 47 species
Aev_g20726	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g21252	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g21253	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g32614	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g21799	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g42377	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30427	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g36656	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene00769.t1	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30624.t2	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G005800.1	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g10888	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g15762	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g43475	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g05291	XTH27, ATXTH27, EXGT-A3	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g09026	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g19892	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g00711	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01031486001	XTH32	Cell wall.hemicellulose.xyloglucan.modification and...	0.03	OrthoFinder output from all 47 species
Gb_00044	XTH32	xyloglucan endotransglucosylase/hydrolase	0.02	OrthoFinder output from all 47 species
Gb_07224	XTH32	xyloglucan endotransglucosylase/hydrolase	0.06	OrthoFinder output from all 47 species
Gb_09461	XTH32	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Gb_33516	XTH27, ATXTH27, EXGT-A3	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
LOC_Os03g63760.1	XTR4, XTH30,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	OrthoFinder output from all 47 species
LOC_Os09g23220.1	EXGT-A2, XTH28,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	OrthoFinder output from all 47 species
Len_g01151	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Len_g34853	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g16117	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10429722g0010	XTH32	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
MA_15222g0020	XTH31, XTR8, ATXTR8	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_20669g0010	XTH32	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
MA_2323484g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_2873g0010	XET, XTH33	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
MA_306910g0010	XTH31, XTR8, ATXTR8	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
MA_31571g0010	EXGT-A2, XTH28,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
MA_358917g0010	XTH27, ATXTH27, EXGT-A3	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Msp_g07196	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g37413	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g02177	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g13796	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g39736	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g43129	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30300	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19219	XTR4, XTH30	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g02844	XTH27, ATXTH27, EXGT-A3	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60042	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g36619	No alias	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Smo232041	XTR4, XTH30	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Solyc01g005120.3.1	EXGT-A2, XTH28,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Solyc11g066270.3.1	XTH32, Solyc11g066270	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Spa_g07184	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g11265	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g55910	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13412	EXGT-A2, XTH28,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e000070_P001	XTH32, Zm00001e000070	xyloglucan endotransglucosylase/hydrolase	0.02	OrthoFinder output from all 47 species
Zm00001e015512_P001	XTR4, XTH30,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Zm00001e023553_P001	XTH32, Zm00001e023553	xyloglucan endotransglucosylase/hydrolase	0.05	OrthoFinder output from all 47 species
Zm00001e034059_P001	EXGT-A2, XTH28,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010713	XET_C	262	298
IPR000757	GH16	49	231

External Links

No external refs found!

LOC_Os03g13570.1 (XTH27, ATXTH27,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation