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  5. LOC_Os03g10030.1

LOC_Os03g10030.1 (LOC_Os03g10030)


Aliases : LOC_Os03g10030

Description : CASP-like protein Os03g0196400 OS=Oryza sativa subsp. japonica (sp|q10qh3|cspll_orysj : 249.0)


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10030.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Aev_g03545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029179001 No alias CASP-like protein 2C1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g32249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 35 183
No external refs found!