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  5. LOC_Os03g08770.1

LOC_Os03g08770.1 (VPS37-1, LOC_Os03g08770)


Aliases : VPS37-1, LOC_Os03g08770

Description : component VPS37 of ESCRT-I complex


Gene families : OG0002321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08770.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT3G53120 VPS37-1 Modifier of rudimentary (Mod(r)) protein 0.04 OrthoFinder output from all 47 species
Aob_g01015 No alias component *(VPS37) of ESCRT-I complex & original... 0.04 OrthoFinder output from all 47 species
Aob_g09305 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g05687 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Cba_g15163 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.30G032100.1 VPS37-1, Ceric.30G032100 component *(VPS37) of ESCRT-I complex & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.80 VPS37-1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Dde_g34374 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Len_g19420 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Lfl_g19841 No alias component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Solyc10g083780.1.1 VPS37-1, Solyc10g083780 component VPS37 of ESCRT-I complex 0.04 OrthoFinder output from all 47 species
Zm00001e000639_P002 VPS37-1, Zm00001e000639 component VPS37 of ESCRT-I complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR009851 Mod_r 80 222
No external refs found!