LOC_Os03g07830.1 (LOC_Os03g07830)

Aliases : LOC_Os03g07830

Description : transcription factor (DREB)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g07830.1
Cluster	HCCA: Cluster_381

Target	Alias	Description	ECC score	Gene Family Method
AT1G03800	ATERF10, ERF10	ERF domain protein 10	0.01	OrthoFinder output from all 47 species
AT1G49120	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Ala_g08073	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.01	OrthoFinder output from all 47 species
Ala_g09848	No alias	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Als_g08964	No alias	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g01030	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g13161	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g32179	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aop_g13135	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene17041.t1	Aspi01Gene17041	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene28739.t1	Aspi01Gene28739	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene37405.t1	Aspi01Gene37405	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g03083	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Cba_g15964	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g12673	No alias	subgroup ERF-VI transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
Gb_29220	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g41780.1	ATERF-9, ERF9,...	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
LOC_Os10g25170.1	RAP2.2, LOC_Os10g25170	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_214063g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Nbi_g04652	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g47053	RRTF1	subgroup ERF-X transcription factor & original description: none	0.12	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002282	No alias	subgroup ERF-VI transcription factor & original...	0.01	OrthoFinder output from all 47 species
Solyc05g013540.1.1	DRN-LIKE, ESR2,...	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Tin_g14637	No alias	subgroup ERF-V transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e019026_P001	CRF3, Zm00001e019026	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Zm00001e032032_P001	ATERF12, ERF12,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	26	76

External Links

No external refs found!

LOC_Os03g07830.1 (LOC_Os03g07830)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation