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  5. LOC_Os03g07140.1

LOC_Os03g07140.1 (MS2, FAR2, LOC_Os03g07140)


Aliases : MS2, FAR2, LOC_Os03g07140

Description : fatty acyl-CoA reductase (MS2). acyl CoA reductase


Gene families : OG0000749 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07140.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00161230 FAR4,... Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
AMTR_s00133p00107670 MS2, FAR2,... Cell wall.cutin and suberin.cuticular lipid... 0.07 OrthoFinder output from all 47 species
AT3G11980 MS2, FAR2 Jojoba acyl CoA reductase-related male sterility protein 0.13 OrthoFinder output from all 47 species
AT3G44540 FAR4 fatty acid reductase 4 0.03 OrthoFinder output from all 47 species
AT3G44560 FAR8 fatty acid reductase 8 0.03 OrthoFinder output from all 47 species
AT4G33790 G7, CER4, FAR3 Jojoba acyl CoA reductase-related male sterility protein 0.03 OrthoFinder output from all 47 species
AT5G22420 FAR7 fatty acid reductase 7 0.03 OrthoFinder output from all 47 species
Adi_g108122 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108123 MS2, FAR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g48361 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007737 MS2, FAR2 not classified & original description: CDS=193-2040 0.02 OrthoFinder output from all 47 species
Ceric.13G009800.1 MS2, FAR2,... not classified & original description: pacid=50635537... 0.09 OrthoFinder output from all 47 species
Dcu_g09261 MS2, FAR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013560001 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
GSVIVT01013561001 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
GSVIVT01013562001 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01030325001 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033433001 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.1 OrthoFinder output from all 47 species
GSVIVT01036171001 G7, CER4, FAR3 Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
Gb_12942 FAR4 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
Gb_18690 MS2, FAR2 fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.05 OrthoFinder output from all 47 species
Gb_26611 FAR4 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Gb_33594 G7, CER4, FAR3 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
Gb_38743 FAR5 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
LOC_Os04g28520.1 FAR1, LOC_Os04g28520 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
LOC_Os04g28620.1 FAR1, LOC_Os04g28620 acyl CoA reductase 0.05 OrthoFinder output from all 47 species
Len_g23229 MS2, FAR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10122399g0010 FAR4 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
MA_10431907g0010 G7, CER4, FAR3 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
MA_10433039g0010 FAR1 Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10433039g0030 FAR4 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_125473g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_2909225g0010 FAR4 Probable fatty acyl-CoA reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_428306g0010 MS2, FAR2 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
MA_6802614g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8606026g0010 MS2, FAR2 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
MA_9850928g0010 MS2, FAR2 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g35169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g35170 FAR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27206 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42363 MS2, FAR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g42364 MS2, FAR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g26243 G7, CER4, FAR3 fatty acyl CoA reductase *(FAR) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g09227 MS2, FAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10289 MS2, FAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo270198 MS2, FAR2 Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Solyc03g051960.4.1 MS2, FAR2, Solyc03g051960 fatty acyl-CoA reductase (MS2). acyl CoA reductase 0.14 OrthoFinder output from all 47 species
Solyc06g074390.3.1 G7, CER4, FAR3,... acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Solyc09g009565.1.1 MS2, FAR2, Solyc09g009565 Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc09g009570.3.1 MS2, FAR2, Solyc09g009570 acyl CoA reductase 0.02 OrthoFinder output from all 47 species
Solyc09g009580.4.1 MS2, FAR2, Solyc09g009580 acyl CoA reductase 0.08 OrthoFinder output from all 47 species
Solyc11g067170.3.1 FAR1, Solyc11g067170 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Zm00001e022068_P003 FAR1, Zm00001e022068 acyl CoA reductase 0.03 OrthoFinder output from all 47 species
Zm00001e024547_P004 FAR1, Zm00001e024547 acyl CoA reductase 0.04 OrthoFinder output from all 47 species
Zm00001e033615_P003 FAR1, Zm00001e033615 acyl CoA reductase 0.01 OrthoFinder output from all 47 species
Zm00001e038924_P001 MS2, FAR2, Zm00001e038924 acyl CoA reductase 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033640 FAR_C 520 584
IPR013120 Far_NAD-bd 96 402
No external refs found!