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  5. LOC_Os03g04560.1

LOC_Os03g04560.1 (LOC_Os03g04560)


Aliases : LOC_Os03g04560

Description : Protein unc-13 homolog OS=Arabidopsis thaliana (sp|q8rx56|unc13_arath : 274.0)


Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g04560.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00188350 evm_27.TU.AmTr_v1... Protein unc-13 homolog OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
AT1G04470 No alias Protein of unknown function (DUF810) 0.09 OrthoFinder output from all 47 species
AT2G25800 No alias Protein of unknown function (DUF810) 0.03 OrthoFinder output from all 47 species
AT2G33420 No alias Protein of unknown function (DUF810) 0.1 OrthoFinder output from all 47 species
Adi_g103345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39400 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
GSVIVT01015324001 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027878001 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
LOC_Os02g55290.1 LOC_Os02g55290 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10436219g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9285214g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08959 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Sam_g35190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g005630.3.1 Solyc03g005630 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Solyc08g066600.4.1 Solyc08g066600 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g080520.4.1 Solyc08g080520 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc09g090480.2.1 Solyc09g090480 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Zm00001e000320_P001 Zm00001e000320 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Zm00001e004610_P001 Zm00001e004610 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Zm00001e027555_P001 Zm00001e027555 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!