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  5. LOC_Os03g03830.1

LOC_Os03g03830.1 (LOC_Os03g03830)


Aliases : LOC_Os03g03830

Description : component EH of TPLATE AP-2 co-adaptor complex


Gene families : OG0001721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g03830.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00148910 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
AT1G20760 No alias Calcium-binding EF hand family protein 0.15 OrthoFinder output from all 47 species
AT1G21630 No alias Calcium-binding EF hand family protein 0.1 OrthoFinder output from all 47 species
Ala_g12845 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Ala_g20697 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Aob_g02398 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Aop_g07020 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Aop_g42329 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Cba_g16130 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72557 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Ceric.17G032800.1 Ceric.17G032800 component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Ceric.18G009900.1 Ceric.18G009900 component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.13 OrthoFinder output from all 47 species
Cre06.g304800 No alias No description available 0.07 OrthoFinder output from all 47 species
Dcu_g14795 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.19 OrthoFinder output from all 47 species
Ehy_g10505 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g12946 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013392001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
GSVIVT01023872001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.11 OrthoFinder output from all 47 species
Gb_27596 No alias component EH of TPLATE AP-2 co-adaptor complex 0.08 OrthoFinder output from all 47 species
Lfl_g02347 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.1 OrthoFinder output from all 47 species
MA_10429959g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434216g0010 No alias component EH of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Mp1g08590.1 No alias component EH of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Mp1g23280.1 No alias component EH of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Nbi_g04448 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g10125 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Ore_g18353 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ore_g23308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12614 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Solyc02g038812.1.1 Solyc02g038812 component EH of TPLATE AP-2 co-adaptor complex 0.14 OrthoFinder output from all 47 species
Solyc02g082540.4.1 Solyc02g082540 component EH of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Solyc04g082560.4.1 Solyc04g082560 component EH of TPLATE AP-2 co-adaptor complex 0.18 OrthoFinder output from all 47 species
Spa_g07596 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Spa_g53539 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e000245_P004 Zm00001e000245 component EH of TPLATE AP-2 co-adaptor complex 0.09 OrthoFinder output from all 47 species
Zm00001e013332_P003 Zm00001e013332 component EH of TPLATE AP-2 co-adaptor complex 0.27 OrthoFinder output from all 47 species
Zm00001e030779_P001 Zm00001e030779 component EH of TPLATE AP-2 co-adaptor complex 0.15 OrthoFinder output from all 47 species
Zm00001e038925_P002 Zm00001e038925 component EH of TPLATE AP-2 co-adaptor complex 0.26 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 8 26
IPR000261 EH_dom 430 501
No external refs found!