LOC_Os03g03550.1 (LOC_Os03g03550)

Aliases : LOC_Os03g03550

Description : transcription factor (bZIP)

Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g03550.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00170620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
Adi_g069548	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077162	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g077163	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g099893	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g05500	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g20866	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g39332	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g16625	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06278	No alias	bZIP class-I transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g14405	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12309	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene24741.t1	Aspi01Gene24741	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32642.t1	Aspi01Gene32642	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56304.t1	Aspi01Gene56304	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G070700.1	Ceric.12G070700	bZIP class-I transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.30G058800.1	ATBZIP34,...	bZIP class-L transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g02815	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g05723	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g41802	ATBZIP61, BZIP61	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07719	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12958	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01001783001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
GSVIVT01014246001	ATBZIP34, BZIP34	RNA biosynthesis.transcriptional activation.bZIP...	0.05	OrthoFinder output from all 47 species
LOC_Os10g38820.1	LOC_Os10g38820	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Len_g08920	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_170065g0010	No alias	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
MA_4209653g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_6407g0010	No alias	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Mp7g00210.1	No alias	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Msp_g01666	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43709	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43734	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20952	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g06353	No alias	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g44071	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014287	ATBZIP34, BZIP34	bZIP class-L transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018533	No alias	bZIP class-I transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020632	ATBZIP34, BZIP34	bZIP class-L transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g04709	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g05962	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e003742_P001	Zm00001e003742	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e010978_P001	AtbZIP52,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e019777_P001	ATBZIP61,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	277	335

External Links

No external refs found!

LOC_Os03g03550.1 (LOC_Os03g03550)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation