LOC_Os03g03540.1 (VND1, ANAC037, LOC_Os03g03540)

Aliases : VND1, ANAC037, LOC_Os03g03540

Description : transcription factor (NAC)

Gene families : OG0000024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g03540.1
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
Aop_g30444	ANAC019, NAC019	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.32G061000.1	ANAC019, NAC019,...	NAC-type transcription factor & original description:...	0.01	OrthoFinder output from all 47 species
GSVIVT01008839001	ANAC002, ATAF1	RNA biosynthesis.transcriptional activation.NAC...	0.02	OrthoFinder output from all 47 species
GSVIVT01028354001	anac074, NAC074	RNA biosynthesis.transcriptional activation.NAC...	0.01	OrthoFinder output from all 47 species
Lfl_g21012	anac078, NAC2	regulatory factor *(AIF1) of anther dehiscence &...	0.02	OrthoFinder output from all 47 species
MA_8980g0010	ANAC002, ATAF1	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Pir_g31040	anac081, ATAF2	NAC-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e019017_P002	ANAC034, LOV1,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	6	133

External Links

No external refs found!