LOC_Os03g02150.1 (LOC_Os03g02150)

Aliases : LOC_Os03g02150

Description : large subunit alpha of AP-2 cargo adaptor complex

Gene families : OG0004347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004347_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g02150.1
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00228310	alpha-ADR,...	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.13	OrthoFinder output from all 47 species
AT5G22770	alpha-ADR	alpha-adaptin	0.12	OrthoFinder output from all 47 species
AT5G22780	No alias	Adaptor protein complex AP-2, alpha subunit	0.04	OrthoFinder output from all 47 species
Adi_g061014	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Aev_g01579	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.1	OrthoFinder output from all 47 species
Ala_g09713	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.12	OrthoFinder output from all 47 species
Als_g16074	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Als_g23880	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.05	OrthoFinder output from all 47 species
Aob_g03579	No alias	large subunit alpha of AP-2 cargo adaptor complex &...	0.06	OrthoFinder output from all 47 species
Aop_g13933	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene14300.t1	alpha-ADR,...	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0485.g073392	No alias	large subunit alpha of AP-2 cargo adaptor complex &...	0.1	OrthoFinder output from all 47 species
Cba_g14620	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.05	OrthoFinder output from all 47 species
Ceric.31G014300.1	alpha-ADR,...	large subunit alpha of AP-2 cargo adaptor complex &...	0.13	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021312.53	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
Cre12.g488850	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.07	OrthoFinder output from all 47 species
Dcu_g01966	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.16	OrthoFinder output from all 47 species
Dde_g06122	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.02	OrthoFinder output from all 47 species
Ehy_g01619	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
GSVIVT01031413001	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.21	OrthoFinder output from all 47 species
Gb_29544	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex	0.1	OrthoFinder output from all 47 species
Len_g00748	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.09	OrthoFinder output from all 47 species
Lfl_g02313	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.17	OrthoFinder output from all 47 species
Mp2g23200.1	No alias	large subunit alpha of AP-2 cargo adaptor complex	0.11	OrthoFinder output from all 47 species
Msp_g09090	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Nbi_g07807	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.08	OrthoFinder output from all 47 species
Ore_g35764	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.07	OrthoFinder output from all 47 species
Pir_g14670	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.08	OrthoFinder output from all 47 species
Ppi_g04673	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006582	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Sam_g18647	No alias	large subunit alpha of AP-2 cargo adaptor complex &...	0.04	OrthoFinder output from all 47 species
Sam_g18648	No alias	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Smo230624	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.1	OrthoFinder output from all 47 species
Solyc06g074650.3.1	alpha-ADR, Solyc06g074650	large subunit alpha of AP-2 cargo adaptor complex	0.09	OrthoFinder output from all 47 species
Spa_g56088	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.06	OrthoFinder output from all 47 species
Tin_g09458	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.05	OrthoFinder output from all 47 species
Zm00001e000090_P002	Zm00001e000090	large subunit alpha of AP-2 cargo adaptor complex	0.15	OrthoFinder output from all 47 species
Zm00001e039078_P002	Zm00001e039078	large subunit alpha of AP-2 cargo adaptor complex	0.27	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
BP	GO:0022406	membrane docking	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
CC	GO:0030906	retromer, cargo-selective complex	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0048278	vesicle docking	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051640	organelle localization	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140029	exocytic process	IEP	HCCA
BP	GO:0140056	organelle localization by membrane tethering	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	28	582
IPR003164	Clathrin_a-adaptin_app_sub_C	887	988
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	779	874

External Links

No external refs found!

LOC_Os03g02150.1 (LOC_Os03g02150)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation