LOC_Os02g57840.2 (LOC_Os02g57840)


Aliases : LOC_Os02g57840

Description : Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 92.8)


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g57840.2

Target Alias Description ECC score Gene Family Method Actions
Aob_g26272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013893 No alias not classified & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.03 OrthoFinder output from all 47 species
Dcu_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Len_g05082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g035910.1.1 Solyc06g035910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g46489 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 69 172
No external refs found!