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  5. LOC_Os02g57640.1

LOC_Os02g57640.1 (BTR1S, BTR1, BTR1L,...)


Aliases : BTR1S, BTR1, BTR1L, LOC_Os02g57640

Description : Protein BTR1 OS=Arabidopsis thaliana (sp|q9lz82|btr1_arath : 310.0)


Gene families : OG0002537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g57640.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g00786 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G010000.1 BTR1S, BTR1,... virus infection resistance factor *(BTR1) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g21722 BTR1S, BTR1, BTR1L virus infection resistance factor *(BTR1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016259_P001 BTR1S, BTR1,... Protein BTR1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e023567_P001 BTR1S, BTR1,... Protein BTR1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 127 192
IPR004088 KH_dom_type_1 43 109
IPR004088 KH_dom_type_1 270 335
No external refs found!