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  5. LOC_Os02g56970.1

LOC_Os02g56970.1 (LOC_Os02g56970)


Aliases : LOC_Os02g56970

Description : no hits & (original description: none)


Gene families : OG0001364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56970.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00206610 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g34558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_8253301g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g30448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g083770.4.1 Solyc06g083770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023613_P002 Zm00001e023613 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 116 207
No external refs found!