LOC_Os02g56860.1 (KCS12, LOC_Os02g56860)


Aliases : KCS12, LOC_Os02g56860

Description : 3-ketoacyl-CoA synthase (KCS)


Gene families : OG0012186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012186_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56860.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT2G28630 KCS12 3-ketoacyl-CoA synthase 12 0.02 OrthoFinder output from all 47 species
GSVIVT01005975001 KCS12 Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 OrthoFinder output from all 47 species
GSVIVT01025052001 KCS12 Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
Solyc11g072990.1.1 KCS3, Solyc11g072990 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
Zm00001e001847_P001 KCS12, Zm00001e001847 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
Zm00001e004603_P002 KCS12, Zm00001e004603 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 333 412
IPR013601 FAE1_typ3_polyketide_synth 25 314
No external refs found!