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  5. LOC_Os02g54700.2

LOC_Os02g54700.2 (ATEIF3G1, EIF3G1,...)


Aliases : ATEIF3G1, EIF3G1, LOC_Os02g54700

Description : component eIF3g of eIF3 mRNA-to-PIC binding complex


Gene families : OG0002732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54700.2
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT3G11400 ATEIF3G1, EIF3G1 eukaryotic translation initiation factor 3G1 0.02 OrthoFinder output from all 47 species
AT5G06000 ATEIF3G2, EIF3G2 eukaryotic translation initiation factor 3G2 0.04 OrthoFinder output from all 47 species
Adi_g124091 ATEIF3G2, EIF3G2 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Als_g02340 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63616.t1 ATEIF3G1,... component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g05082 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.33 ATEIF3G1, EIF3G1 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre06.g269450 ATEIF3G1, EIF3G1 Protein biosynthesis.translation... 0.06 OrthoFinder output from all 47 species
Dcu_g00640 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01034107001 ATEIF3G1, EIF3G1 Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Mp6g13130.1 ATEIF3G1, EIF3G1 component eIF3g of eIF3 mRNA-to-PIC binding complex 0.17 OrthoFinder output from all 47 species
Nbi_g21812 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ore_g25734 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g19910 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Solyc08g074790.3.1 ATEIF3G1,... component eIF3g of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Tin_g45797 ATEIF3G1, EIF3G1 component *(eIF3g) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e021823_P001 ATEIF3G1,... component eIF3g of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 210 276
IPR024675 eIF3g_N 33 156
No external refs found!