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  5. LOC_Os02g52960.1

LOC_Os02g52960.1 (LOC_Os02g52960)


Aliases : LOC_Os02g52960

Description : Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana (sp|q9c5x4|atx1_arath : 132.0)


Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g52960.1

Target Alias Description ECC score Gene Family Method Actions
AT1G77800 No alias PHD finger family protein 0.1 OrthoFinder output from all 47 species
Ala_g06882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35511.t1 Aspi01Gene35511 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G080500.1 Ceric.29G080500 not classified & original description: pacid=50624681... 0.03 OrthoFinder output from all 47 species
Dcu_g03210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15953 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008944001 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_12353 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Gb_35107 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g19258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022590 No alias not classified & original description: CDS=632-4768 0.02 OrthoFinder output from all 47 species
Sam_g14038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407186 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g22217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030795_P001 Zm00001e030795 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!