Aliases : ATRAD54, CHR25, RAD54, LOC_Os02g52510
Description : chromatin remodeling factor (Rad54)
Gene families : OG0003309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003309_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os02g52510.1 | |
Cluster | HCCA: Cluster_83 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cba_g11241 | ATRAD54, CHR25, RAD54 | chromatin remodeling factor *(RAD54) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G046200.1 | ATRAD54, CHR25,... | chromatin remodeling factor *(RAD54) & original... | 0.11 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020614.39 | ATRAD54, CHR25, RAD54 | Chromatin organisation.chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Cre10.g430950 | ATRAD54, CHR25, RAD54 | Chromatin organisation.chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
Gb_22245 | ATRAD54, CHR25, RAD54 | DNA repair and recombination protein RAD54 OS=Oryza... | 0.08 | OrthoFinder output from all 47 species | |
Len_g24635 | ATRAD54, CHR25, RAD54 | chromatin remodeling factor *(RAD54) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Mp6g06120.1 | ATRAD54, CHR25, RAD54 | chromatin remodeling factor (Rad54) | 0.08 | OrthoFinder output from all 47 species | |
Solyc04g056410.3.1 | ATRAD54, CHR25,... | chromatin remodeling factor (Rad54) | 0.11 | OrthoFinder output from all 47 species | |
Spa_g37488 | ATRAD54, CHR25, RAD54 | chromatin remodeling factor *(RAD54) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g49299 | ATRAD54, CHR25, RAD54 | chromatin remodeling factor *(RAD54) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015936_P001 | ATRAD54, CHR25,... | chromatin remodeling factor (Rad54) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
CC | GO:0030915 | Smc5-Smc6 complex | IEP | HCCA |
MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0106068 | SUMO ligase complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |