LOC_Os02g50940.1 (LOC_Os02g50940)


Aliases : LOC_Os02g50940

Description : no hits & (original description: none)


Gene families : OG0000815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50940.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00162120 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G62865 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G65613 No alias No description available 0.03 OrthoFinder output from all 47 species
Aev_g30384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58562.t1 Aspi01Gene58562 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.37G043800.1 Ceric.37G043800 not classified & original description: pacid=50616406... 0.02 OrthoFinder output from all 47 species
Dac_g19602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_19812 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g36795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g01130.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g007130.1.1 Solyc07g007130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g07513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015798_P001 Zm00001e015798 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e032144_P001 Zm00001e032144 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!