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  5. LOC_Os02g50880.1

LOC_Os02g50880.1 (DegP9, LOC_Os02g50880)


Aliases : DegP9, LOC_Os02g50880

Description : protease (Deg)


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00077590 DegP9,... Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Ala_g13624 DegP10 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17032 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12699 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.68 DegP9 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.39 DegP9 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Cre13.g579901 DegP9 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Lfl_g17389 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
MA_7242206g0010 DegP10 protease (Deg) 0.03 OrthoFinder output from all 47 species
Mp1g05470.1 DegP9 protease (Deg) 0.03 OrthoFinder output from all 47 species
Ore_g17266 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13579 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02283 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28821 No alias protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g026400.2.1 DegP9, Solyc12g026400 protease (Deg) 0.03 OrthoFinder output from all 47 species
Solyc12g062290.2.1 DegP9, Solyc12g062290 protease (Deg) 0.03 OrthoFinder output from all 47 species
Spa_g09027 DegP10 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08635 DegP10 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11965 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0035658 Mon1-Ccz1 complex IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 421 564
IPR001478 PDZ 321 412
No external refs found!