1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g50730.1

LOC_Os02g50730.1 (MMP, LOC_Os02g50730)


Aliases : MMP, LOC_Os02g50730

Description : Matrixin-type metalloprotease


Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50730.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00201730 MMP,... Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
AT1G24140 No alias Matrixin family protein 0.04 OrthoFinder output from all 47 species
AT1G70170 MMP matrix metalloproteinase 0.03 OrthoFinder output from all 47 species
Ceric.23G054500.1 Ceric.23G054500 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ehy_g30544 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01020151001 MMP Protein degradation.peptidase families.metallopeptidase... 0.07 OrthoFinder output from all 47 species
GSVIVT01032545001 MMP Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Gb_17716 No alias Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Gb_39954 MMP Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
Gb_39955 MMP Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
MA_10426152g0010 No alias Matrixin-type metalloprotease 0.06 OrthoFinder output from all 47 species
Msp_g10511 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Solyc04g005040.1.1 Solyc04g005040 Matrixin-type metalloprotease 0.06 OrthoFinder output from all 47 species
Solyc04g005050.1.1 Solyc04g005050 Matrixin-type metalloprotease 0.07 OrthoFinder output from all 47 species
Zm00001e015780_P001 MMP, Zm00001e015780 Matrixin-type metalloprotease 0.06 OrthoFinder output from all 47 species
Zm00001e036059_P001 MMP, Zm00001e036059 Matrixin-type metalloprotease 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 164 323
IPR002477 Peptidoglycan-bd-like 62 119
No external refs found!