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  5. LOC_Os02g49680.1

LOC_Os02g49680.1 (CaS, LOC_Os02g49680)


Aliases : CaS, LOC_Os02g49680

Description : calcium sensor (CAS)


Gene families : OG0004109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49680.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00201460 CaS,... External stimuli response.drought.stomatal closure... 0.16 OrthoFinder output from all 47 species
AT5G23060 CaS calcium sensing receptor 0.11 OrthoFinder output from all 47 species
Adi_g012905 CaS calcium sensor *(CAS) & original description: none 0.11 OrthoFinder output from all 47 species
Aev_g00981 CaS calcium sensor *(CAS) & original description: none 0.13 OrthoFinder output from all 47 species
Ala_g22495 CaS calcium sensor *(CAS) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07249 CaS calcium sensor *(CAS) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19911 CaS calcium sensor *(CAS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11195 CaS calcium sensor *(CAS) & original description: none 0.13 OrthoFinder output from all 47 species
Aop_g18807 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010583 CaS calcium sensor *(CAS) & original description: CDS=1-1176 0.03 OrthoFinder output from all 47 species
Cba_g25989 CaS calcium sensor *(CAS) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G078000.1 CaS, Ceric.05G078000 calcium sensor *(CAS) & original description:... 0.25 OrthoFinder output from all 47 species
Cre12.g497300 No alias External stimuli response.drought.stomatal closure... 0.02 OrthoFinder output from all 47 species
Dac_g30981 CaS calcium sensor *(CAS) & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g03931 CaS calcium sensor *(CAS) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04559 CaS calcium sensor *(CAS) & original description: none 0.14 OrthoFinder output from all 47 species
GSVIVT01008201001 CaS External stimuli response.drought.stomatal closure... 0.07 OrthoFinder output from all 47 species
Len_g01235 CaS calcium sensor *(CAS) & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g08258 CaS calcium sensor *(CAS) & original description: none 0.04 OrthoFinder output from all 47 species
MA_87479g0010 CaS calcium sensor (CAS) 0.13 OrthoFinder output from all 47 species
Mp6g00590.1 CaS calcium sensor (CAS) 0.29 OrthoFinder output from all 47 species
Msp_g10526 CaS calcium sensor *(CAS) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14085 CaS calcium sensor *(CAS) & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g11195 CaS calcium sensor *(CAS) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12476 CaS calcium sensor *(CAS) & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g17539 CaS calcium sensor *(CAS) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g114450.3.1 CaS, Solyc03g114450 calcium sensor (CAS) 0.13 OrthoFinder output from all 47 species
Spa_g12800 CaS calcium sensor *(CAS) & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g03959 CaS calcium sensor *(CAS) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023457_P001 CaS, Zm00001e023457 calcium sensor (CAS) 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 212 329
No external refs found!