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Aliases : VCS, LOC_Os02g49090
Description : scaffold component VCS of mRNA decapping complex
Gene families : OG0001030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00131900 | VCS,... | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055830 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30114 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13274 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g08777 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g14873 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27245 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G068900.1 | VCS, Ceric.06G068900 | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G025800.1 | VCS, Ceric.33G025800 | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001038.27 | VCS | Varicose-related protein OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g553100 | VCR | Varicose-related protein OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14564 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g32341 | VCS | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11716 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10360 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07938 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g20389 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006976001 | VCS | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014783001 | VCS | RNA processing.RNA decay.deadenylation-dependent... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_04906 | VCS | scaffold component VCS of mRNA decapping complex | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g18274 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10431534g0020 | VCS | Enhancer of mRNA-decapping protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431534g0030 | VCS | scaffold component VCS of mRNA decapping complex | 0.03 | OrthoFinder output from all 47 species | |
| MA_39123g0010 | VCS | Enhancer of mRNA-decapping protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g11710.1 | VCS | scaffold component VCS of mRNA decapping complex | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14526 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26178 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01496 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09332 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g36602 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03283 | VCS | scaffold component *(VCS) of mRNA decaPping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009621 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07074 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08563 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015689_P001 | VCS, Zm00001e015689 | scaffold component VCS of mRNA decapping complex | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e023399_P003 | VCS, Zm00001e023399 | scaffold component VCS of mRNA decapping complex | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032401 | EDC4_WD40 | 200 | 513 |
| No external refs found! |