1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g49050.2

LOC_Os02g49050.2 (LOC_Os02g49050)


Aliases : LOC_Os02g49050

Description : Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana (sp|f4jre0|tmn12_arath : 983.0)


Gene families : OG0001938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001938_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49050.2

Target Alias Description ECC score Gene Family Method Actions
AT4G12650 No alias Endomembrane protein 70 protein family 0.06 OrthoFinder output from all 47 species
AT5G35160 No alias Endomembrane protein 70 protein family 0.12 OrthoFinder output from all 47 species
Adi_g014931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011669 No alias not classified & original description: CDS=1-1932 0.06 OrthoFinder output from all 47 species
Cba_g17134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g494350 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Dcu_g19738 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01001034001 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01030146001 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_09059 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g10092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05591 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_371g0020 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Msp_g03216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g17282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo175941 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc06g065830.3.1 Solyc06g065830 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g056050.1.1 Solyc07g056050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g22948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016131_P001 Zm00001e016131 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 55 605
No external refs found!