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  5. LOC_Os02g47620.1

LOC_Os02g47620.1 (LOC_Os02g47620)


Aliases : LOC_Os02g47620

Description : Pheophytinase, chloroplastic OS=Arabidopsis thaliana (sp|q9ffz1|pph_arath : 80.1)


Gene families : OG0005435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g47620.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00231930 evm_27.TU.AmTr_v1... Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G36530 No alias alpha/beta-Hydrolases superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g018083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10820 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g54023 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04078.t1 Aspi01Gene04078 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011515 No alias not classified & original description: CDS=131-1312 0.04 OrthoFinder output from all 47 species
Cba_g20752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.20G060200.1 Ceric.20G060200 not classified & original description: pacid=50566415... 0.06 OrthoFinder output from all 47 species
Cre10.g456150 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g05022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09953 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g25838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04951 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g04690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_196209g0010 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g03260.1 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g11152 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g00635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g65212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g23732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo160384 No alias Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g062610.3.1 Solyc02g062610 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Spa_g21863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023325_P002 Zm00001e023325 Pheophytinase, chloroplastic OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 93 205
No external refs found!