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  5. LOC_Os02g47230.1

LOC_Os02g47230.1 (BRXL1, ATBRXL1, LOC_Os02g47230)


Aliases : BRXL1, ATBRXL1, LOC_Os02g47230

Description : Protein Brevis radix-like 2 OS=Oryza sativa subsp. japonica (sp|q6zik7|brxl2_orysj : 587.0)


Gene families : OG0001788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g47230.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.07G086500.1 BRX-LIKE2,... plasma membrane-to-nucleus signalling factor *(BRX) &... 0.02 OrthoFinder output from all 47 species
Len_g36943 ATBRXL4, BRXL4, BRX-LIKE4 plasma membrane-to-nucleus signalling factor *(BRX) &... 0.03 OrthoFinder output from all 47 species
Mp1g24560.1 BRX, NLM9 Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006395 BRX-LIKE2, ATBRXL2 not classified & original description: CDS=250-2007 0.02 OrthoFinder output from all 47 species
Solyc06g062880.2.1 BRX-LIKE2,... Protein Brevis radix-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e006397_P001 BRX, NLM9, Zm00001e006397 Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027988 BRX_N 28 47
IPR013591 Brevis_radix_dom 161 216
IPR013591 Brevis_radix_dom 356 410
No external refs found!