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  5. LOC_Os02g45480.1

LOC_Os02g45480.1 (ZFWD1, LOC_Os02g45480)


Aliases : ZFWD1, LOC_Os02g45480

Description : C3H zinc finger transcription factor


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g45480.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Adi_g007764 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Adi_g081467 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aev_g01394 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aob_g01629 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Cre12.g510150 No alias Zinc finger CCCH domain-containing protein 48... 0.02 OrthoFinder output from all 47 species
MA_126258g0010 No alias C3H zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Mp7g18530.1 No alias C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Pir_g01969 ZFWD1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g19239 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Solyc03g026350.3.1 ZFWD1, Solyc03g026350 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g15735 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0035658 Mon1-Ccz1 complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 143 178
IPR001680 WD40_repeat 304 338
IPR001680 WD40_repeat 267 299
IPR041367 Znf-CCCH_4 112 132
No external refs found!