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  5. LOC_Os02g40770.2

LOC_Os02g40770.2 (SUVR4, SDG31, LOC_Os02g40770)


Aliases : SUVR4, SDG31, LOC_Os02g40770

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40770.2
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Pp3c3_14470V3.1 SUVR4, SDG31, Pp3c3_14470 SET-domain containing protein lysine methyltransferase... 0.01 OrthoFinder output from all 47 species
Zm00001e003847_P002 SUVR4, SDG31,... class V/Su(var) histone methyltransferase component of... 0.04 OrthoFinder output from all 47 species
Zm00001e022012_P001 SUVR4, SDG31,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 407 564
IPR001214 SET_dom 584 706
IPR018848 WIYLD_domain 20 79
No external refs found!