1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g40700.1

LOC_Os02g40700.1 (LOC_Os02g40700)


Aliases : LOC_Os02g40700

Description : no hits & (original description: none)


Gene families : OG0001717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001717_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00228770 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00099p00142390 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g039425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49946.t1 Aspi01Gene49946 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0022.g016105 No alias not classified & original description: CDS=106-459 0.03 OrthoFinder output from all 47 species
Cba_g15001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G074100.1 Ceric.19G074100 not classified & original description: pacid=50576605... 0.02 OrthoFinder output from all 47 species
Ceric.1Z058300.1 Ceric.1Z058300 not classified & original description: pacid=50628215... 0.03 OrthoFinder output from all 47 species
Ceric.1Z058400.1 Ceric.1Z058400 not classified & original description: pacid=50628218... 0.03 OrthoFinder output from all 47 species
Gb_08668 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432956g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_97010g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g25685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022052 No alias not classified & original description: CDS=196-567 0.03 OrthoFinder output from all 47 species
Zm00001e023001_P001 Zm00001e023001 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008579 UGlyAH_Cupin_dom 36 108
No external refs found!