1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g39590.1

LOC_Os02g39590.1 (LOC_Os02g39590)


Aliases : LOC_Os02g39590

Description : GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana (sp|q9shp6|gdl10_arath : 213.0)


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39590.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G28570 No alias SGNH hydrolase-type esterase superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G28580 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G27360 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G62280 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G14450 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g13263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15140.t1 Aspi01Gene15140 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15140.t2 Aspi01Gene15140 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28045.t1 Aspi01Gene28045 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34338.t1 Aspi01Gene34338 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34340.t1 Aspi01Gene34340 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34345.t1 Aspi01Gene34345 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42819.t1 Aspi01Gene42819 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50554.t1 MVP1, Aspi01Gene50554 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014885 No alias not classified & original description: CDS=1-324 0.02 OrthoFinder output from all 47 species
Azfi_s0187.g056734 No alias not classified & original description: CDS=25-1020 0.02 OrthoFinder output from all 47 species
Ceric.06G034900.1 Ceric.06G034900 not classified & original description: pacid=50620908... 0.02 OrthoFinder output from all 47 species
Ceric.30G052800.1 FXG1, ATFXG1,... not classified & original description: pacid=50608510... 0.01 OrthoFinder output from all 47 species
Dde_g47820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008870001 No alias Esterase OS=Hevea brasiliensis 0.03 OrthoFinder output from all 47 species
LOC_Os03g25030.1 LOC_Os03g25030 Sinapine esterase OS=Brassica napus... 0.05 OrthoFinder output from all 47 species
MA_42044g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g21008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c21_20530V3.1 Pp3c21_20530 GDSL-like Lipase/Acylhydrolase superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000406 No alias not classified & original description: CDS=1-180 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007728 No alias not classified & original description: CDS=1-1128 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0242.g026639 No alias not classified & original description: CDS=1-276 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0242.g026640 No alias not classified & original description: CDS=1-513 0.02 OrthoFinder output from all 47 species
Sam_g34691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107439 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo426724 No alias Esterase OS=Hevea brasiliensis 0.02 OrthoFinder output from all 47 species
Solyc01g099040.4.1 Solyc01g099040 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.02 OrthoFinder output from all 47 species
Solyc02g093500.4.1 Solyc02g093500 GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g006250.2.1 Solyc03g006250 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g28103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55757 GLIP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011116_P002 Zm00001e011116 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e012850_P001 Zm00001e012850 GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e016450_P001 Zm00001e016450 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e026050_P001 Zm00001e026050 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036461_P002 Zm00001e036461 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 45 387
No external refs found!