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  5. LOC_Os02g32860.1

LOC_Os02g32860.1 (LOC_Os02g32860)


Aliases : LOC_Os02g32860

Description : poly-(ADP-ribose) polymerase (PARP3). poly(ADP-ribose) polymerase (PARP)


Gene families : OG0001236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g32860.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT5G22470 No alias NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases 0.04 OrthoFinder output from all 47 species
Dcu_g05674 ATPARP1, PARP1, PP, APP EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036149001 No alias Protein modification.ADP-ribosylation.poly(ADP-ribose)... 0.05 OrthoFinder output from all 47 species
Solyc01g009470.2.1 Solyc01g009470 poly-(ADP-ribose) polymerase (PARP3). poly(ADP-ribose)... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
BP GO:0006471 obsolete protein ADP-ribosylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR012317 Poly(ADP-ribose)pol_cat_dom 614 819
IPR004102 Poly(ADP-ribose)pol_reg_dom 467 600
IPR008893 WGR_domain 349 429
IPR012982 PADR1 115 164
IPR001357 BRCT_dom 202 288
No external refs found!