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  5. LOC_Os02g32350.1

LOC_Os02g32350.1 (Tudor1, AtTudor1,...)


Aliases : Tudor1, AtTudor1, TSN1, LOC_Os02g32350

Description : ribonuclease (TSN)


Gene families : OG0004117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g32350.1

Target Alias Description ECC score Gene Family Method Actions
AT5G07350 Tudor1, AtTudor1, TSN1 TUDOR-SN protein 1 0.04 OrthoFinder output from all 47 species
AT5G61780 TSN2, Tudor2, AtTudor2 TUDOR-SN protein 2 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016015 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: CDS=1-3189 0.02 OrthoFinder output from all 47 species
GSVIVT01005677001 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Len_g17365 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g04260.1 Tudor1, AtTudor1, TSN1 ribonuclease (TSN) 0.03 OrthoFinder output from all 47 species
Ore_g20110 TSN2, Tudor2, AtTudor2 mRNA endoribonuclease *(TSN) & original description: none 0.02 OrthoFinder output from all 47 species
Smo165776 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Solyc03g118010.4.1 Tudor1,... ribonuclease (TSN) 0.03 OrthoFinder output from all 47 species
Solyc03g118020.3.1 Tudor1,... ribonuclease (TSN) 0.04 OrthoFinder output from all 47 species
Zm00001e022564_P001 Tudor1,... ribonuclease (TSN) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 273 364
IPR016071 Staphylococal_nuclease_OB-fold 614 711
IPR016071 Staphylococal_nuclease_OB-fold 411 552
IPR016071 Staphylococal_nuclease_OB-fold 41 149
IPR016071 Staphylococal_nuclease_OB-fold 858 964
IPR002999 Tudor 729 852
No external refs found!