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  5. LOC_Os02g22070.1

LOC_Os02g22070.1 (LOC_Os02g22070)


Aliases : LOC_Os02g22070

Description : HPE1 plastidial RNA splicing factor


Gene families : OG0007581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007581_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os02g22070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00132770 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT1G70200 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Aev_g01358 No alias plastidial RNA splicing factor *(HPE1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.04G006400.1 Ceric.04G006400 plastidial RNA splicing factor *(HPE1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020168001 No alias RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Len_g14318 No alias plastidial RNA splicing factor *(HPE1) & original... 0.03 OrthoFinder output from all 47 species
MA_10435608g0010 No alias HPE1 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Mp1g21620.1 No alias HPE1 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Msp_g01582 No alias plastidial RNA splicing factor *(HPE1) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g24330 No alias plastidial RNA splicing factor *(HPE1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g06305 No alias plastidial RNA splicing factor *(HPE1) & original... 0.06 OrthoFinder output from all 47 species
Sam_g40721 No alias plastidial RNA splicing factor *(HPE1) & original... 0.02 OrthoFinder output from all 47 species
Solyc05g006070.4.1 Solyc05g006070 HPE1 plastidial RNA splicing factor 0.07 OrthoFinder output from all 47 species
Spa_g30782 No alias plastidial RNA splicing factor *(HPE1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e013842_P001 Zm00001e013842 HPE1 plastidial RNA splicing factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!