LOC_Os02g18140.1 (LOC_Os02g18140)

Aliases : LOC_Os02g18140

Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum (sp|q7xa39|rga4_solbu : 266.0)

Gene families : OG0015466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015466_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g18140.1
Cluster	HCCA: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g18000.1	LOC_Os02g18000	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.06	OrthoFinder output from all 47 species
LOC_Os02g18070.1	LOC_Os02g18070	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.04	OrthoFinder output from all 47 species
LOC_Os02g18080.1	LOC_Os02g18080	Putative disease resistance protein RGA1 OS=Solanum...	0.07	OrthoFinder output from all 47 species
LOC_Os09g20030.1	LOC_Os09g20030	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041118	Rx_N	38	104
IPR002182	NB-ARC	235	453

External Links

No external refs found!