- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ELIP, ELIP1, LOC_Os02g16560
Description : ELIP LHC-related protein
Gene families : OG0000684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000684_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g16560.1 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00270470 | ELIP, ELIP1,... | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G22840 | ELIP, ELIP1 | Chlorophyll A-B binding family protein | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene71952.t1 | ELIP, ELIP1,... | LHC-related protein *(ELIP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G073100.1 | ELIP, ELIP1,... | LHC-related protein *(ELIP) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G057500.1 | Ceric.24G057500 | LHC-related protein *(ELIP) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| MA_113999g0010 | ELIP, ELIP1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_129323g0030 | ELIP, ELIP1 | ELIP LHC-related protein | 0.01 | OrthoFinder output from all 47 species | |
| MA_269057g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Mp3g12510.1 | ELIP, ELIP1 | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g12520.1 | ELIP, ELIP1 | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g18550.1 | No alias | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g18560.1 | No alias | ELIP LHC-related protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g18580.1 | No alias | ELIP LHC-related protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g18630.1 | No alias | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g20350.1 | No alias | ELIP LHC-related protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g14520.1 | ELIP2 | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g20750.1 | ELIP, ELIP1 | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g20760.1 | ELIP, ELIP1 | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g20770.1 | ELIP, ELIP1 | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g082700.2.1 | ELIP, ELIP1,... | ELIP LHC-related protein | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032929_P001 | ELIP2, Zm00001e032929 | ELIP LHC-related protein | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 84 | 162 |
| No external refs found! |