LOC_Os02g13900.1 (BEH4, LOC_Os02g13900)


Aliases : BEH4, LOC_Os02g13900

Description : transcription factor (BES/BZR). transcription factor (BZR)


Gene families : OG0000871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g13900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00129760 BEH3,... RNA biosynthesis.transcriptional activation.BZR... 0.04 OrthoFinder output from all 47 species
AT4G18890 BEH3 BES1/BZR1 homolog 3 0.05 OrthoFinder output from all 47 species
Adi_g024488 BEH4 BZR-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13479 BEH4 BZR-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04397 BEH4 BZR-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27098 BEH4 BZR-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01438 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11700.t1 BEH3, Aspi01Gene11700 BZR-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54803.t1 BEH4, Aspi01Gene54803 BZR-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g030953 BEH4 BZR-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g61376 BEH3 BZR-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g70771 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12154 BEH3 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14148 BEH4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14712 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07392 BEH4 BZR-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009656001 BES1, BZR2 RNA biosynthesis.transcriptional activation.BZR... 0.06 OrthoFinder output from all 47 species
GSVIVT01014154001 No alias RNA biosynthesis.transcriptional activation.BZR... 0.04 OrthoFinder output from all 47 species
LOC_Os01g10610.1 BEH4, LOC_Os01g10610 transcription factor (BES/BZR). transcription factor (BZR) 0.04 OrthoFinder output from all 47 species
Len_g21301 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g41760 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58401 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34193 BEH4 BZR-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_195595g0010 BEH3 transcription factor (BES/BZR). transcription factor (BZR) 0.02 OrthoFinder output from all 47 species
MA_83430g0010 No alias transcription factor (BZR) 0.03 OrthoFinder output from all 47 species
Mp1g13260.1 BEH4 transcription factor (BES/BZR). transcription factor (BZR) 0.02 OrthoFinder output from all 47 species
Msp_g07862 BEH4 BZR-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17941 BEH4 BZR-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g07064 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026334 BEH2 BZR-type transcription factor & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0269.g026994 BEH4 BZR-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Spa_g12546 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25268 BZR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47565 BEH4 BZR-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19445 BEH4 BZR-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016533_P002 BEH4, Zm00001e016533 transcription factor (BES/BZR). transcription factor (BZR) 0.04 OrthoFinder output from all 47 species
Zm00001e035361_P002 BEH1, Zm00001e035361 transcription factor (BES/BZR). transcription factor (BZR) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR008540 BES1_N 6 165
No external refs found!