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Aliases : LOC_Os02g13190
Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 155.0)
Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g13190.1 | |
| Cluster | HCCA: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00037390 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00128640 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00067p00091510 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT4G04480 | No alias | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g20113 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34497.t1 | Aspi01Gene34497 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34569.t1 | Aspi01Gene34569 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z099600.1 | Ceric.1Z099600 | not classified & original description: pacid=50573463... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z099700.1 | Ceric.1Z099700 | not classified & original description: pacid=50573460... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z099800.1 | Ceric.1Z099800 | not classified & original description: pacid=50573466... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z159800.1 | Ceric.1Z159800 | not classified & original description: pacid=50567680... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z159900.1 | Ceric.1Z159900 | not classified & original description: pacid=50567683... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z228600.1 | Ceric.1Z228600 | not classified & original description: pacid=50606299... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G013700.1 | Ceric.33G013700 | not classified & original description: pacid=50607125... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g26560 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g30200 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51610 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g17787 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g17788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19663 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012691001 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g13220.1 | LOC_Os02g13220 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| Mp5g17910.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38437 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18978 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo405256 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g080840.1.1 | Solyc02g080840 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g080850.1.1 | Solyc02g080850 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005102 | signaling receptor binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| MF | GO:0008083 | growth factor activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0008283 | cell population proliferation | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030545 | signaling receptor regulator activity | IEP | HCCA |
| MF | GO:0030546 | signaling receptor activator activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0048018 | receptor ligand activity | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027949 | Chloroplast_duf | 94 | 423 |
| No external refs found! |