Aliases : GATA22, CGA1, GNL, LOC_Os02g12790
Description : transcription factor (GATA)
Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00254680 | GATA22, CGA1,... | No description available | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00017p00242860 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00056p00080350 | GATA9,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00147p00053080 | GATA15,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00155p00085360 | GATA11,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AT3G20750 | GATA29 | GATA transcription factor 29 | 0.02 | OrthoFinder output from all 47 species | |
AT4G34680 | GATA3 | GATA transcription factor 3 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g035600 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g036776 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g057963 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g058313 | GATA4 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g067935 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g14443 | GNC, GATA21 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g11812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g25849 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g43029 | GATA9 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene10302.t2 | GATA23, Aspi01Gene10302 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene30025.t1 | GATA5, Aspi01Gene30025 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene67105.t1 | GATA5, Aspi01Gene67105 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene69106.t1 | GATA4, Aspi01Gene69106 | transcription factor *(A/B-GATA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0078.g038241 | GATA4 | transcription factor *(A/B-GATA) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001094.21 | GATA7 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Cre01.g025050 | GATA23 | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g19757 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g20454 | GNC, GATA21 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g34018 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g18348 | GATA1 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01017011001 | GATA12 | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01018833001 | GATA5 | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01035614001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Gb_25568 | GATA20 | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g08150.1 | LOC_Os09g08150 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g32070.1 | GATA1, LOC_Os10g32070 | transcription factor (GATA) | 0.04 | OrthoFinder output from all 47 species | |
Len_g07439 | GATA23 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g33806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10434815g0010 | GATA4 | transcription factor (GATA) | 0.04 | OrthoFinder output from all 47 species | |
MA_10436047g0010 | GATA17 | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species | |
MA_14038g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g03490.1 | GATA23 | transcription factor (GATA) | 0.05 | OrthoFinder output from all 47 species | |
Msp_g19890 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g14050 | GATA19 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g30520 | GATA2 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g37666 | BME3-ZF, BME3, GATA8 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g44692 | GATA5 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g25103 | GATA1 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0024.g009072 | GATA4 | transcription factor *(A/B-GATA) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0063.g015681 | GATA12 | transcription factor *(A/B-GATA) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0211.g025929 | GATA22, CGA1, GNL | transcription factor *(A/B-GATA) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g08124 | No alias | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39840 | No alias | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g033660.4.1 | GATA5, Solyc03g033660 | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29922 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e002326_P001 | GATA4, Zm00001e002326 | transcription factor (GATA) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005940_P001 | GATA4, Zm00001e005940 | transcription factor (GATA) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e009216_P001 | GATA4, Zm00001e009216 | transcription factor (GATA) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037876_P002 | GATA4, Zm00001e037876 | transcription factor (GATA) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 178 | 212 |
No external refs found! |