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  5. LOC_Os02g11820.1

LOC_Os02g11820.1 (NIG, LOC_Os02g11820)


Aliases : NIG, LOC_Os02g11820

Description : Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana (sp|q8rxe7|agd14_arath : 185.0)


Gene families : OG0001644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g11820.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00132020 ZIGA4, AGD14,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AMTR_s00142p00058560 NIG,... Probable ADP-ribosylation factor GTPase-activating... 0.05 OrthoFinder output from all 47 species
AT1G08680 ZIGA4, AGD14 ARF GAP-like zinc finger-containing protein ZIGA4 0.03 OrthoFinder output from all 47 species
Aev_g07977 NIG not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29018 NIG not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34749 NIG not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02172.t1 NIG, Aspi01Gene02172 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33563 NIG not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g302900 No alias Probable ADP-ribosylation factor GTPase-activating... 0.01 OrthoFinder output from all 47 species
Dcu_g01941 NIG not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01015419001 NIG Probable ADP-ribosylation factor GTPase-activating... 0.05 OrthoFinder output from all 47 species
GSVIVT01029915001 ZIGA4, AGD14 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Lfl_g02243 NIG not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g14170.1 NIG Probable ADP-ribosylation factor GTPase-activating... 0.02 OrthoFinder output from all 47 species
Ore_g08756 NIG not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14575 NIG not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g076990.3.1 ZIGA4, AGD14,... class IV ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Solyc12g006990.2.1 NIG, Solyc12g006990 Probable ADP-ribosylation factor GTPase-activating... 0.04 OrthoFinder output from all 47 species
Spa_g47135 NIG not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014495_P002 NIG, Zm00001e014495 Probable ADP-ribosylation factor GTPase-activating... 0.09 OrthoFinder output from all 47 species
Zm00001e019485_P005 ZIGA4, AGD14,... class IV ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Zm00001e024971_P001 NIG, Zm00001e024971 Probable ADP-ribosylation factor GTPase-activating... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 13 123
No external refs found!