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  5. LOC_Os02g10860.1

LOC_Os02g10860.1 (TED 5, HY5, LOC_Os02g10860)


Aliases : TED 5, HY5, LOC_Os02g10860

Description : transcription factor (bZIP). transcription factor (HY5). UV-B signal transduction transcriptional regulator


Gene families : OG0002588 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g10860.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00145150 HYH,... External stimuli response.light.UV-B light.UV-B signal... 0.02 OrthoFinder output from all 47 species
AT3G17609 HYH HY5-homolog 0.06 OrthoFinder output from all 47 species
AT5G11260 TED 5, HY5 Basic-leucine zipper (bZIP) transcription factor family protein 0.04 OrthoFinder output from all 47 species
Ala_g14228 HYH regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Als_g13084 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.04 OrthoFinder output from all 47 species
Aop_g11028 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010315 HYH regulatory protein *(HY5) of UV-B signal transduction &... 0.06 OrthoFinder output from all 47 species
Cba_g30668 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Ceric.13G093700.1 TED 5, HY5,... regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Ceric.14G091500.1 HYH, Ceric.14G091500 regulatory protein *(HY5) of UV-B signal transduction &... 0.04 OrthoFinder output from all 47 species
Ceric.1Z124000.1 Ceric.1Z124000 not classified & original description: pacid=50620924... 0.02 OrthoFinder output from all 47 species
Cre06.g310500 HYH External stimuli response.light.UV-B light.UV-B signal... 0.05 OrthoFinder output from all 47 species
Dac_g22408 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Dcu_g03461 HYH regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Ehy_g08079 HYH regulatory protein *(HY5) of UV-B signal transduction &... 0.02 OrthoFinder output from all 47 species
Ehy_g12765 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.02 OrthoFinder output from all 47 species
Gb_33985 HYH transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Msp_g10109 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Ore_g06715 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.02 OrthoFinder output from all 47 species
Pir_g01533 TED 5, HY5 regulatory protein *(HY5) of UV-B signal transduction &... 0.05 OrthoFinder output from all 47 species
Zm00001e013997_P001 TED 5, HY5,... transcription factor (bZIP). transcription factor (HY5).... 0.02 OrthoFinder output from all 47 species
Zm00001e037325_P002 TED 5, HY5,... transcription factor (bZIP). transcription factor (HY5).... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 172 233
IPR001220 Legume_lectin_dom 271 343
No external refs found!