LOC_Os02g09650.1 (ATERF3, ERF3, LOC_Os02g09650)

Aliases : ATERF3, ERF3, LOC_Os02g09650

Description : transcription factor (ERF)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g09650.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	ATERF3, ERF3,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00232450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT1G22985	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT1G50640	ATERF3, ERF3	ethylene responsive element binding factor 3	0.02	OrthoFinder output from all 47 species
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT2G38340	DREB19	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.04	OrthoFinder output from all 47 species
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.03	OrthoFinder output from all 47 species
Adi_g008628	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Adi_g039127	ATERF-9, ERF9, ATERF9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g059856	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g074655	HRD	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g03062	DREB26	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aev_g08226	ERF38, ATERF38	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g09461	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g12610	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aev_g24731	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g41268	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g42330	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10396	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g10573	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g30791	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Als_g36600	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03086	ATERF8, ATERF-8, ERF8	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g04287	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aob_g07731	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g18891	HRE2	subgroup ERF-VI transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g33993	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g35811	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g10151	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aop_g19913	DREB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06525.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene07603.t1	DEAR1, CEJ1,...	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene18475.t1	Aspi01Gene18475	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene21110.t1	DEAR2, Aspi01Gene21110	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene23166.t1	DREB26, Aspi01Gene23166	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34450.t1	Aspi01Gene34450	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47254.t1	TINY2, Aspi01Gene47254	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene47256.t1	tny, Aspi01Gene47256	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000091	ATERF-9, ERF9, ATERF9	not classified & original description: CDS=1-585	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000819	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Cba_g03183	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g18800	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g22237	RAP2.4	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g24909	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g26938	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ceric.02G058000.1	ERF7, ATERF7,...	not classified & original description: pacid=50585662...	0.03	OrthoFinder output from all 47 species
Ceric.05G034300.1	RAP2.1, Ceric.05G034300	not classified & original description: pacid=50578765...	0.02	OrthoFinder output from all 47 species
Ceric.10G005300.1	RAP2.12, Ceric.10G005300	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ceric.20G089300.1	PUCHI, Ceric.20G089300	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.24G073300.1	ERF72, EBP,...	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ceric.30G046300.1	Ceric.30G046300	not classified & original description: pacid=50608225...	0.03	OrthoFinder output from all 47 species
Dac_g22113	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g32017	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g03905	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g16085	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Dcu_g16520	RAP2.11	transcription factor *(ERN1) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g17033	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Dcu_g20355	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g33863	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g36822	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g50775	ORA47	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g23157	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dde_g25479	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g05437	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g12115	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g28516	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g29688	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Gb_07474	ERF-1, ATERF-1	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Gb_07992	RAP2.9, DEAR5	Ethylene-responsive transcription factor RAP2-9...	0.02	OrthoFinder output from all 47 species
Gb_08437	RAP2.12	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Gb_12965	ERF110	Ethylene-responsive transcription factor ABR1...	0.04	OrthoFinder output from all 47 species
Gb_26738	DREB26	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Gb_26739	DREB26	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Gb_36992	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Gb_41020	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os04g34970.1	ERF110, LOC_Os04g34970	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Len_g11014	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g28544	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g28599	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g01837	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g03871	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Lfl_g04609	ORA47	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g27902	ATERF8, ATERF-8, ERF8	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g31233	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Lfl_g40221	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_113446g0010	ORA47	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_18454g0020	ATERF3, ERF3	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_4032g0010	ATERF3, ERF3	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_8384767g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Msp_g04750	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Msp_g14031	ATERF4, RAP2.5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g24887	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Msp_g35440	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Msp_g42164	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g09103	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Nbi_g12944	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Nbi_g14223	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g03958	TINY2	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g07819	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g07820	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g28637	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g32583	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g44016	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g44017	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g49983	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g62201	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09943	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g33487	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pp3c10_11910V3.1	Pp3c10_11910	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Sam_g21922	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g33704	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g38891	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g44662	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g065980.4.1	ERF72, EBP,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc02g093130.3.1	DEAR3, Solyc02g093130	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Solyc04g078640.3.1	DEAR2, Solyc04g078640	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Spa_g05271	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g14585	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Spa_g14734	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16012	tny	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g16502	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g21487	RAP2.6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g21493	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Spa_g22026	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g22128	PUCHI	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g25610	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g52072	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g10351	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e000608_P002	Rap2.6L, Zm00001e000608	Ethylene-responsive transcription factor ERF073...	0.02	OrthoFinder output from all 47 species
Zm00001e000611_P001	HRE1, Zm00001e000611	Ethylene-responsive transcription factor ERF073...	0.03	OrthoFinder output from all 47 species
Zm00001e006753_P003	RAP2.9, DEAR5,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e007332_P001	Zm00001e007332	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e013096_P001	ATERF3, ERF3,...	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Zm00001e013685_P001	ATERF4, RAP2.5,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e013927_P001	ATERF3, ERF3,...	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Zm00001e019159_P001	ERF110, Zm00001e019159	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e023078_P001	Zm00001e023078	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e023816_P001	Zm00001e023816	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e024001_P001	Zm00001e024001	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e025064_P001	ATERF3, ERF3,...	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Zm00001e028920_P001	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e030279_P001	ATERF3, ERF3,...	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e031438_P002	HRE2, Zm00001e031438	Ethylene-responsive transcription factor RAP2-3...	0.05	OrthoFinder output from all 47 species
Zm00001e032483_P001	Zm00001e032483	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e035837_P001	ERF72, EBP,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e041533_P001	ERF38, ATERF38,...	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e041781_P001	DEAR2, Zm00001e041781	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0004852	uroporphyrinogen-III synthase activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
CC	GO:0036452	ESCRT complex	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA
BP	GO:0071985	multivesicular body sorting pathway	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	15	64

External Links

No external refs found!

LOC_Os02g09650.1 (ATERF3, ERF3, LOC_Os02g09650)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation