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  5. LOC_Os02g09180.1

LOC_Os02g09180.1 (LOC_Os02g09180)


Aliases : LOC_Os02g09180

Description : no hits & (original description: none)


Gene families : OG0001633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g09180.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00034580 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G32440 No alias Ubiquitin system component Cue protein 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001225 No alias not classified & original description: CDS=86-856 0.03 OrthoFinder output from all 47 species
Dcu_g01152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015583001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_102108g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008360 No alias not classified & original description: CDS=1-1017 0.03 OrthoFinder output from all 47 species
Spa_g16552 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013876_P002 Zm00001e013876 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030471_P001 Zm00001e030471 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR003892 CUE 55 93
No external refs found!