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  5. LOC_Os02g05640.1

LOC_Os02g05640.1 (HB-2, ATHB2, ATHB-2,...)


Aliases : HB-2, ATHB2, ATHB-2, HAT4, LOC_Os02g05640

Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g05640.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00245530 HAT9,... No description available 0.03 OrthoFinder output from all 47 species
Adi_g021164 HAT14 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g048337 HB-2, ATHB2, ATHB-2, HAT4 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g082135 HAT22 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g03647 HAT14 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.04G000400.1 HAT14, Ceric.04G000400 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g11143 HAT14 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_12174g0010 HAT22 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_8378650g0010 HAT14 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g35413 HAT22 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g43756 HAT22 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g03355 HB-2, ATHB2, ATHB-2, HAT4 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc05g008050.3.1 ATHB17, HB17,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc06g060830.3.1 HB-2, ATHB2,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc08g007270.4.1 HB-2, ATHB2,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e000928_P002 HAT22, Zm00001e000928 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e038644_P001 HAT22, Zm00001e038644 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 105 159
IPR003106 Leu_zip_homeo 161 192
No external refs found!