1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g04340.1

LOC_Os02g04340.1 (LOC_Os02g04340)


Aliases : LOC_Os02g04340

Description : transcription factor (NLP)


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g04340.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g19885 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10866 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G009600.1 Ceric.07G009600 transcription factor *(NIN) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021168.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g38831 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013370001 No alias External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
Len_g12958 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55478 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29547 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53032 No alias transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 562 634
No external refs found!