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  5. LOC_Os02g03750.1

LOC_Os02g03750.1 (LOC_Os02g03750)


Aliases : LOC_Os02g03750

Description : Polygalacturonase OS=Actinidia deliciosa (sp|p35336|pglr_actde : 358.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 202.9)


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g03750.1

Target Alias Description ECC score Gene Family Method Actions
AT1G10640 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G26610 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
GSVIVT01031298001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
Gb_27331 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
Len_g55532 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
MA_90135g0010 No alias Polygalacturonase OS=Chamaecyparis obtusa... 0.02 OrthoFinder output from all 47 species
Smo111266 ADPG2, PGAZAT Polygalacturonase OS=Chamaecyparis obtusa 0.03 OrthoFinder output from all 47 species
Smo78038 No alias Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
Zm00001e038712_P001 QRT2, Zm00001e038712 Polygalacturonase OS=Actinidia deliciosa... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 141 450
No external refs found!