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  5. LOC_Os02g03730.1

LOC_Os02g03730.1 (LOC_Os02g03730)


Aliases : LOC_Os02g03730

Description : no hits & (original description: none)


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g03730.1

Target Alias Description ECC score Gene Family Method Actions
AT2G14880 No alias SWIB/MDM2 domain superfamily protein 0.02 OrthoFinder output from all 47 species
Ceric.18G018500.1 Ceric.18G018500 not classified & original description: pacid=50621767... 0.03 OrthoFinder output from all 47 species
Gb_37604 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g005590.4.1 Solyc08g005590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025309_P001 Zm00001e025309 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 54 127
No external refs found!