- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LPA2, LOC_Os02g03250
Description : LPA2 protein involved in PS-II assembly
Gene families : OG0007940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007940_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G51545 | LPA2 | low psii accumulation2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113721 | LPA2 | protein involved in PS-II assembly *(LPA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g00634 | LPA2 | protein involved in PS-II assembly *(LPA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre02.g105650 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01018558001 | LPA2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_15276 | LPA2 | LPA2 protein involved in PS-II assembly | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g26360.1 | LPA2 | LPA2 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g14504 | LPA2 | protein involved in PS-II assembly *(LPA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c26_11240V3.1 | Pp3c26_11240 | low psii accumulation2 | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62326 | No alias | protein involved in PS-II assembly *(LPA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12946 | No alias | protein involved in PS-II assembly *(LPA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g083570.3.1 | LPA2, Solyc03g083570 | LPA2 protein involved in PS-II assembly | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g32900 | LPA2 | protein involved in PS-II assembly *(LPA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013517_P001 | LPA2, Zm00001e013517 | LPA2 protein involved in PS-II assembly | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |