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  5. LOC_Os02g02730.1

LOC_Os02g02730.1 (LOC_Os02g02730)


Aliases : LOC_Os02g02730

Description : no hits & (original description: none)


Gene families : OG0003270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g02730.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00366p00011950 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s03035p00009310 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g108378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36606.t1 Aspi01Gene36606 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36608.t1 Aspi01Gene36608 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36609.t1 Aspi01Gene36609 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0087.g042339 No alias not classified & original description: CDS=369-1871 0.04 OrthoFinder output from all 47 species
Cba_g05854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008681001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_20265 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15392g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!