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  5. LOC_Os01g72360.1

LOC_Os01g72360.1 (LOC_Os01g72360)


Aliases : LOC_Os01g72360

Description : no hits & (original description: none)


Gene families : OG0005743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72360.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00245800 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00063p00151320 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G28190 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
AT5G12340 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Ehy_g06291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037265001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_10892 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_11824 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_26414 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g24100.1 LOC_Os03g24100 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
MA_10169333g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10248626g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10381881g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_168522g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_182245g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_218732g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_223132g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_25590g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_74636g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g057830.1.1 Solyc04g057830 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e011175_P001 Zm00001e011175 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018591_P001 Zm00001e018591 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e024210_P001 Zm00001e024210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031559_P001 Zm00001e031559 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e038180_P001 Zm00001e038180 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 199
No external refs found!